STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103361206Somatostatin 1, tandem duplicate 2. (125 aa)    
Predicted Functional Partners:
LOC103363980
Cortistatin.
     
 0.945
LOC103361207
Somatostatin.
     
 0.937
CENPS
Centromere protein S.
     
 0.867
wscd2
WSC domain containing 2.
     
 0.733
kremen1
Kringle containing transmembrane protein 1.
     
 0.733
wscd1
WSC domain containing 1b.
     
 0.733
lag3
Uncharacterized protein.
  
     0.465
LOC103356862
Uncharacterized protein.
  
     0.458
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
  
  
  0.431
relt
RELT TNF receptor.
  
     0.422
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.