STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndc80NDC80 kinetochore complex component. (638 aa)    
Predicted Functional Partners:
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.999
nuf2
UF2 component of NDC80 kinetochore complex.
  
 0.999
bub1
Uncharacterized protein.
   
 0.998
ttk
Ttk protein kinase.
   
 
 0.996
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.994
LOC103368661
Uncharacterized protein.
   
 0.988
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.988
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.986
mis12
MIS12 kinetochore complex component.
   
 0.979
dsn1
DSN1 component of MIS12 kinetochore complex.
   
 0.979
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.