STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103355727Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (426 aa)    
Predicted Functional Partners:
gsr
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.755
gsto1
Glutathione S-transferase omega 2.
     
 0.712
gss
Glutathione synthetase.
     
 0.704
vars1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.677
ENSSPAP00000006472
Uncharacterized protein.
    
 0.662
mgst1
Microsomal glutathione S-transferase 1.2.
     
 0.656
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
    
  0.642
ggnbp2
Gametogenetin binding protein 2.
     
 0.642
LOC103367824
Glutathione S-transferase mu, tandem duplicate 1.
     
 0.601
aifm2
Apoptosis inducing factor mitochondria associated 2.
     
 0.556
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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