STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg2ATP-binding cassette, sub-family G (WHITE), member 2d. (658 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.898
LOC103369344
ATP-binding cassette, sub-family G (WHITE), member 2c.
  
  
 
0.841
abcc2
Uncharacterized protein.
  
 0.818
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
 
   
 0.670
apoa4
Uncharacterized protein.
   
 0.660
LOC103355445
2-epi-5-epi-valiolone synthase.
   
 
 0.657
LOC103354135
Uncharacterized protein.
   
 0.646
LOC103354136
Uncharacterized protein.
   
 0.646
LOC103357730
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.639
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.632
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.