STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdadc1Cytidine and dCMP deaminase domain containing 1. (512 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 
 0.912
tk1
Thymidine kinase.
  
 
 0.907
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 
  0.871
ak9
Adenylate kinase 9.
  
 0.859
TYMP
Thymidine phosphorylase.
    
 0.857
dtymk
Deoxythymidylate kinase (thymidylate kinase).
    
 0.823
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
 0.823
ntpcr
Nucleoside-triphosphatase, cancer-related.
     
 0.810
NT5M
5',3'-nucleotidase, mitochondrial.
     
 0.806
upp2
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.799
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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