STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxw9F-box and WD repeat domain containing 9. (591 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.981
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.979
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
    
 0.951
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.904
UBB
Ubiquitin B.
    
 0.898
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.862
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.862
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.848
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.848
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.836
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.