STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp1aPeptidylprolyl isomerase. (108 aa)    
Predicted Functional Partners:
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.840
LOC103374798
Uncharacterized protein.
   
 0.793
ENSSPAP00000024939
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
   
 0.793
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.784
calm1
Calmodulin 1.
   
 0.784
LOC103353515
Calmodulin.
   
 0.784
LOC103370449
Calmodulin.
   
 0.784
ryr2
Ryanodine receptor 2b (cardiac).
    
 0.755
ryr3
Ryanodine receptor 3.
    
 0.755
LOC103368738
Ryanodine receptor 1b (skeletal).
    
 0.755
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.