STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371897RAWUL domain-containing protein. (337 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
   
 0.961
rnf2
Ring finger protein 2.
   
 0.961
LOC103361728
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.920
cbx8
Chromobox homolog 8b.
    
 0.903
LOC103361729
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.903
ENSSPAP00000023218
Chromobox homolog 2 (Drosophila Pc class).
    
 0.901
ENSSPAP00000019384
Uncharacterized protein.
    
 0.899
cbx6
Chromobox homolog 6a.
    
 0.899
ENSSPAP00000012080
Chromo domain-containing protein.
    
 0.870
cbx4
Chromo domain-containing protein.
    
 0.849
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.