STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362294Solute carrier family 13 member 2. (574 aa)    
Predicted Functional Partners:
mlycd
Malonyl-CoA decarboxylase.
    
 0.739
LOC103366006
Amino acid transporter.
    
 0.552
ENSSPAP00000001662
Uncharacterized protein.
    
 0.552
LOC103363977
Amino acid transporter.
    
 0.552
slc1a1
Amino acid transporter.
    
 0.552
ccdc77
Coiled-coil domain containing 77.
    
 0.552
LOC103368436
Amino acid transporter.
    
 0.552
slc1a4
Solute carrier family 1 member 4.
    
 0.552
LOC103362937
Amino acid transporter.
    
 0.552
LOC103353070
Amino acid transporter.
    
 0.552
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.