STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngbNeuroglobin; Belongs to the globin family. (159 aa)    
Predicted Functional Partners:
LOC103355652
Cytochrome b5 reductase 4.
   
 0.755
LOC103368903
Papilin b, proteoglycan-like sulfated glycoprotein.
     
 0.656
ENSSPAP00000009846
Peptidase S1 domain-containing protein.
    
 0.626
ENSSPAP00000010022
Uncharacterized protein.
   
  
 0.583
LOC103353989
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.579
ENSSPAP00000021345
Transmembrane protein 160.
      
 0.579
LOC103358229
KN motif and ankyrin repeat domains 2.
    
 
 0.565
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
   
  
 0.536
ENSSPAP00000019056
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.528
papln
Papilin a, proteoglycan-like sulfated glycoprotein.
     
 0.527
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.