STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103352998WAP four-disulfide core domain 2. (124 aa)    
Predicted Functional Partners:
ENSSPAP00000008117
Uncharacterized protein.
    
 0.566
hgfac
HGF activator.
    
 0.566
ENSSPAP00000025007
Uncharacterized protein.
    
 0.566
ENSSPAP00000025109
Hyaluronan binding protein 2.
    
 0.566
LOC103363869
Uncharacterized protein.
   
 0.542
ENSSPAP00000021840
RP1 axonemal microtubule associated.
   
 0.542
LOC103367824
Glutathione S-transferase mu, tandem duplicate 1.
   
 
 0.507
LOC103368998
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.507
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.494
LOC103371891
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.494
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.