STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371229Low density lipoprotein receptor adaptor protein 1a. (307 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
    
  0.981
ENSSPAP00000031427
Uncharacterized protein.
    
  0.981
ENSSPAP00000031428
Uncharacterized protein.
    
  0.981
ldlr
Low density lipoprotein receptor a.
    
 0.934
LOC103353863
Low density lipoprotein receptor b.
    
 0.934
ENSSPAP00000008411
Si:dkey-71h2.2.
  
  
 
0.901
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
  
  
 
0.900
ap1b1
AP complex subunit beta.
    
 0.879
LOC103360248
AP complex subunit beta.
    
 0.879
dab2
DAB adaptor protein 2.
     
 0.859
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.