STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000014152C-type lectin domain-containing protein. (162 aa)    
Predicted Functional Partners:
glg1
Golgi glycoprotein 1b.
    
 0.877
cd34
Si:ch211-286o17.1.
   
 
 0.855
selplg
Uncharacterized protein.
   
 
 0.832
cd44
CD44 molecule (Indian blood group) b.
   
 0.774
snx17
Sorting nexin 17.
    
 
 0.762
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.606
LOC103367548
Uncharacterized protein.
   
 0.593
tyrobp
Uncharacterized protein.
   
 0.579
LOC103375319
Platelet/endothelial cell adhesion molecule 1.
   
 0.568
ENSSPAP00000021979
Si:dkey-237i9.8.
   
 0.568
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.