STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napgN-ethylmaleimide-sensitive factor attachment protein, gamma b. (311 aa)    
Predicted Functional Partners:
stx8
t-SNARE coiled-coil homology domain-containing protein.
    
 0.952
nbas
Neuroblastoma amplified sequence.
    
 0.951
LOC103367352
N-ethylmaleimide-sensitive factor b.
   
 0.946
nsf
N-ethylmaleimide-sensitive factor a.
   
 0.946
vamp4
Vesicle-associated membrane protein 4.
   
 0.935
NAPB
NSF attachment protein beta.
   
 0.923
LOC103361771
N-ethylmaleimide-sensitive factor attachment protein, beta b.
   
 0.923
LOC103368726
N-ethylmaleimide-sensitive factor attachment protein, alpha b.
   
 0.923
ENSSPAP00000025083
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.918
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.898
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.