STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
haspinSi:dkeyp-26a9.2. (1330 aa)    
Predicted Functional Partners:
bub1
Uncharacterized protein.
   
 
 0.663
LOC103367279
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 
 0.619
SGO1
Shugoshin 1.
   
  
 0.619
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 
 0.619
ENSSPAP00000000551
Cell division cycle associated 5.
   
  
 0.586
ENSSPAP00000027283
Cell division cycle associated 5.
   
  
 0.586
mcm10
Minichromosome maintenance 10 replication initiation factor.
   
  
 0.557
incenp
Uncharacterized protein.
   
  
 0.554
LOC103368661
Uncharacterized protein.
   
 
 0.550
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 
 0.550
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.