STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374761GB1/RHD3-type G domain-containing protein. (523 aa)    
Predicted Functional Partners:
uevld
UEV and lactate/malate dehyrogenase domains.
   
 
 0.680
SPAST
Spastin; Belongs to the AAA ATPase family.
   
 
 0.540
LOC103359706
Reticulon.
    
 
 0.522
LOC103358632
Receptor expression-enhancing protein.
    
 
 0.508
tsg101
Tumor susceptibility 101a.
     
 0.467
ENSSPAP00000009628
UEV domain-containing protein.
     
 0.467
LOC103363280
Reticulon.
    
 
 0.460
LOC103356348
Reticulon.
    
 
 0.458
rtn1
Reticulon.
    
 
 0.449
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.447
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.