STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366332Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1053 aa)    
Predicted Functional Partners:
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.942
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.941
ENSSPAP00000024618
Integrin beta; Belongs to the integrin beta chain family.
   
 0.912
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.907
LOC103365304
Integrin beta; Belongs to the integrin beta chain family.
   
 0.895
itgb4
Integrin beta.
   
 0.869
LOC103364929
Integrin beta; Belongs to the integrin beta chain family.
   
 0.862
LOC103366491
Integrin beta; Belongs to the integrin beta chain family.
   
 0.862
LOC103366961
Integrin beta.
   
 0.856
ENSSPAP00000021246
Integrin_b_cyt domain-containing protein.
   
 0.856
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.