STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000014501RAB39B, member RAS oncogene family. (205 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
    
 0.889
ENSSPAP00000031427
Uncharacterized protein.
    
 0.889
ENSSPAP00000031428
Uncharacterized protein.
    
 0.889
wdr41
WD repeat domain 41.
    
 0.887
c9orf72
Zgc:100846.
    
  0.868
LOC103363630
RAB42, member RAS oncogene family a.
   
 
0.867
smcr8
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 0.862
LOC103365098
Smith-Magenis syndrome chromosome region, candidate 8b.
    
 0.858
lmln
Leishmanolysin-like peptidase.
    
 0.843
ENSSPAP00000029958
Uncharacterized protein.
    
 0.825
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.