STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl16ADP-ribosylation factor-like 16. (176 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
    
  0.756
bard1
BRCA1 associated RING domain 1.
    
 0.616
arl9
ADP-ribosylation factor-like 9.
    
 0.608
YTHDC2
YTH domain containing 2.
    
  0.579
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.575
sufu
Suppressor of fused homolog.
    
  0.567
ENSSPAP00000004797
NDK domain-containing protein.
    
 0.553
ENSSPAP00000021089
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.551
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.541
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.