STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aampAngio-associated, migratory cell protein. (418 aa)    
Predicted Functional Partners:
rpl10
Ribosomal protein L10.
    
 
 0.994
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.929
LOC103360159
Uncharacterized protein.
   
  
 0.897
tbxa2r
Thromboxane A2 receptor.
    
 0.886
hspbp1
HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.
    
 
 0.883
mrpl16
Mitochondrial ribosomal protein L16.
    
 
 0.883
ENSSPAP00000031316
SIL1 nucleotide exchange factor.
    
 
 0.883
ENSSPAP00000031318
Uncharacterized protein.
    
 
 0.883
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.860
mrto4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.849
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.