STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000014763Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.941
ENSSPAP00000011040
Nuclear receptor subfamily 1, group H, member 5.
    
 0.864
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.864
pgr
Progesterone receptor.
    
 0.856
ENSSPAP00000027013
Nuclear receptor subfamily 1, group I, member 2.
    
 0.852
LOC103354986
Vitamin D receptor b.
    
 0.838
LOC103352823
Uncharacterized protein.
    
 0.838
LOC103358709
CREB binding protein b.
   
 0.835
crebbp
CREB binding protein a.
   
 0.832
LOC103373366
Androgen receptor.
    
 0.831
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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