STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ablim2Actin binding LIM protein family, member 2. (727 aa)    
Predicted Functional Partners:
DMTN
Dematin actin binding protein.
    
 
0.845
LOC103370045
Actin binding LIM protein 1a.
    
 
0.845
dmtn
HP domain-containing protein.
    
 
0.845
LOC103372064
Cell division cycle 42.
     
 0.823
CDC42
Cell division cycle 42.
     
 0.823
LOC103356837
Uncharacterized protein.
     
 0.806
LOC103358302
Uncharacterized protein.
  
  
 
0.803
ENSSPAP00000011846
Actin binding LIM protein family, member 3.
  
  
 
0.802
rac3
Rac family small GTPase 3b.
     
 0.767
rac2
Uncharacterized protein.
     
 0.767
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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