STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375319Platelet/endothelial cell adhesion molecule 1. (789 aa)    
Predicted Functional Partners:
LOC103363496
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.946
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.940
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.858
LOC103357838
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.857
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.857
LOC103359554
Uncharacterized protein.
   
 0.794
LOC103362533
Junction plakoglobin a.
   
 0.794
LOC103371495
Uncharacterized protein.
   
 0.793
inpp5d
Inositol polyphosphate-5-phosphatase D.
    
 0.761
LOC103362136
Uncharacterized protein.
   
 0.742
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.