STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan16Tetraspanin. (248 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
   
  0.653
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
   
  0.653
LOC103360420
Macrophage stimulating 1 receptor a.
   
  0.653
mst1r
Macrophage stimulating 1 receptor b.
   
  0.653
LOC103358541
Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.
   
  0.495
pdgfb
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
   
  0.495
LOC103361154
Uncharacterized protein.
   
 
  0.475
LOC103369585
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
  0.414
LOC103354683
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
  0.414
LOC103369873
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
  0.414
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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