STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fndc1Fibronectin type III domain containing 1. (1737 aa)    
Predicted Functional Partners:
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.984
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.984
ENSSPAP00000007341
Netrin g1a.
    
 0.765
ENSSPAP00000008357
Vav 3 guanine nucleotide exchange factor b.
    
 0.765
LOC103359994
Netrin 1b.
    
 0.754
LOC103371734
Netrin 5.
    
 0.754
ntng2
Netrin G2.
    
 0.754
NTNG2
Netrin g2a.
    
 0.754
LOC103369160
Netrin 2.
    
 0.754
NTN1
Netrin 1.
    
 0.754
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.