STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354669Fork-head domain-containing protein. (392 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.793
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.645
ENSSPAP00000004243
Fork-head domain-containing protein.
  
0.615
LOC103361723
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.611
LOC103367507
TNF receptor-associated factor 6-like.
   
 0.611
LOC103366349
Retinoblastoma binding protein 4, like.
   
 0.608
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.608
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.608
LOC103357053
RB binding protein 4, chromatin remodeling factor.
   
 0.608
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.603
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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