STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103364560Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (397 aa)    
Predicted Functional Partners:
ENSSPAP00000024906
5-hydroxytryptamine (serotonin) receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.731
ENSSPAP00000024838
5-hydroxytryptamine (serotonin) receptor 3A.
    
0.712
LOC103357075
Si:ch211-39a7.1.
   
 
0.578
ENSSPAP00000005316
Uncharacterized protein.
   
 
0.578
chrna7
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
   
 
0.578
LOC103373569
Uncharacterized protein.
   
 
0.578
LOC103358586
Uncharacterized protein.
   
 
0.578
LOC103356520
Uncharacterized protein.
   
 
0.578
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 
 0.408
LOC103371521
Uncharacterized protein.
   
 
 0.408
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.