STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353028Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (305 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.750
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
  0.750
LOC103360420
Macrophage stimulating 1 receptor a.
    
  0.750
mst1r
Macrophage stimulating 1 receptor b.
    
  0.750
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.671
hdc
Histidine decarboxylase.
  
 0.563
ENSSPAP00000028059
Dopa decarboxylase.
  
 0.563
wdr90
WD repeat domain 90.
    
 0.558
ENSSPAP00000029355
LAM_G_DOMAIN domain-containing protein.
    
  0.554
ENSSPAP00000029361
VWFA domain-containing protein.
    
  0.554
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.