STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d2TBC1 domain family, member 2. (843 aa)    
Predicted Functional Partners:
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 0.867
wdr90
WD repeat domain 90.
    
   0.837
plk2
Serine/threonine-protein kinase PLK.
    
 0.784
plk3
Serine/threonine-protein kinase PLK.
    
 0.784
plk4
Polo-like kinase 4 (Drosophila).
    
 0.784
PLK1
Serine/threonine-protein kinase PLK.
    
 0.784
LOC103366613
Uncharacterized protein.
    
 0.761
LOC103359881
RAB7a, member RAS oncogene family.
    
 0.761
ENSSPAP00000023042
Si:ch73-335l21.4.
    
 
 0.752
lrrk1
Leucine-rich repeat kinase 1.
    
 
 0.626
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.