STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356786Purine-rich element binding protein Aa. (285 aa)    
Predicted Functional Partners:
LOC103367655
Interleukin 11a.
     
 0.615
fmr1
Fragile X mental retardation 1.
    
 
 0.493
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.466
rfc3
Replication factor C (activator 1) 3.
    
 
 0.426
fxr2
Fragile X mental retardation, autosomal homolog 2.
    
 
 0.425
fxr1
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.425
adarb2
Adenosine deaminase RNA specific B2 (inactive).
    
 
 0.406
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.