STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375368LRRCT domain-containing protein. (868 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.870
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.853
rbbp5
Retinoblastoma binding protein 5.
    
 0.646
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.645
ENSSPAP00000023042
Si:ch73-335l21.4.
    
 0.629
ranbp2
RAN binding protein 2.
    
 0.626
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.625
nup133
Nucleoporin 133.
    
 0.623
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.610
nup160
Nucleoporin 160.
    
 0.607
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.