STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353603Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (114 aa)    
Predicted Functional Partners:
supt5h
Transcription elongation factor SPT5.
    
 
 0.940
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
   
 
 0.906
iws1
TFIIS N-terminal domain-containing protein.
    
 
 0.905
polr2j
Polymerase (RNA) II (DNA directed) polypeptide J.
   
   0.899
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.898
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
   
   0.897
POLR2E
RNA polymerase II subunit E.
  
   0.896
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
   0.891
ENSSPAP00000025562
Polymerase (RNA) II (DNA directed) polypeptide L.
   
   0.886
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
   0.885
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.