STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lyrm1LYR motif containing 1; Belongs to the complex I LYR family. (129 aa)    
Predicted Functional Partners:
b9d1
B9 protein domain 1.
    
 0.818
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.813
ENSSPAP00000004531
Tr-type G domain-containing protein.
    
 0.770
LOC103376165
EFG_C domain-containing protein.
    
 0.770
LOC103363049
Tr-type G domain-containing protein.
    
 0.770
ahi1
Abelson helper integration site 1.
    
 0.759
mks1
MKS transition zone complex subunit 1.
    
 0.755
tctn2
Tectonic family member 2.
    
 0.746
tmem67
Transmembrane protein 67.
   
 
 0.738
LOC103375078
Kin17 DNA and RNA binding protein.
    
 0.716
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.