STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap21Rho GTPase activating protein 21a. (2067 aa)    
Predicted Functional Partners:
LOC103372064
Cell division cycle 42.
    
 0.675
CDC42
Cell division cycle 42.
    
 0.675
rhof
Ras homolog family member F.
    
 0.671
rnd3
Rho family GTPase 3a.
    
 0.632
LOC103358261
Rho family GTPase 1b.
    
 0.632
RND1
Rho family GTPase 1.
    
 0.632
ENSSPAP00000013389
Ras homolog gene family, member Gd.
    
 0.619
LOC103354640
Ras homolog family member Gb.
    
 0.619
ENSSPAP00000027029
Ras homolog family member H.
    
 0.573
LOC103370959
Ras homolog family member Q.
    
 0.573
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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