STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrbp2Nuclear receptor binding protein 2b. (505 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.540
LOC103371418
Protein kinase domain-containing protein.
  
 
  
0.539
LOC103372645
Nuclear receptor binding protein 1.
  
 
  
0.537
pycr3
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
      
 0.526
srfbp1
BUD22 domain-containing protein.
      
 0.523
lonp2
Lon protease homolog; Belongs to the peptidase S16 family.
      
 0.522
exosc4
Exosome component 4.
      
 0.495
LOC103363855
OTU deubiquitinase with linear linkage specificity a.
      
 0.465
tsc22d1
Zgc:65895.
    
 
 0.436
tsc22d4
Uncharacterized protein.
    
 
 0.436
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.