STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF17Rho guanine nucleotide exchange factor (GEF) 17. (2745 aa)    
Predicted Functional Partners:
sting1
Transmembrane protein 173.
   
 0.868
tp53bp1
Tumor protein p53 binding protein, 1.
    
 0.816
LOC103352803
Uncharacterized protein.
    
  0.658
LOC103360700
Guanine nucleotide binding protein (G protein), alpha 13b.
    
  0.658
gna12
G protein subunit alpha 12.
    
  0.658
LOC103353006
Death domain-containing protein.
    
 0.632
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.632
ENSSPAP00000004300
DH domain-containing protein.
    
 0.616
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
    
 0.616
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
    
 0.616
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.