STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353763Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. (285 aa)    
Predicted Functional Partners:
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.939
blvra
Biliverdin reductase A.
     
 0.931
blvrb
Biliverdin reductase B.
    
 0.928
fxn
Frataxin.
     
 0.917
LOC103374891
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.913
LOC103359987
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
  
  
 
0.899
LOC103364245
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.898
LOC103373376
Heme oxygenase 2a.
  
  
 
0.771
LOC103358700
Heme oxygenase 2b.
  
  
 
0.769
LOC103367251
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
     
 0.767
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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