STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358676Si:dkey-21a6.5. (300 aa)    
Predicted Functional Partners:
NCSTN
Nicastrin.
    
 0.831
LOC103368490
APH1B gamma secretase subunit.
    
  0.811
tnn
Tenascin N.
    
 0.795
ENSSPAP00000007814
Uncharacterized protein.
    
 0.795
tnr
Tenascin R (restrictin, janusin).
    
 0.795
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.795
LOC103374965
Zmp:0000000846.
    
 0.795
LOC103356464
Tenascin C.
    
 0.795
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.759
LOC103357838
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
  0.759
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.