STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366878Protein kinase domain-containing protein. (876 aa)    
Predicted Functional Partners:
srsf9
Serine and arginine rich splicing factor 9.
    
 0.885
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
   0.846
LOC103365142
Uncharacterized protein.
    
 0.813
LOC103362657
Serine and arginine rich splicing factor 1a.
    
 0.813
srsf5
Serine and arginine rich splicing factor 5a.
    
 0.806
LOC103362762
Serine and arginine rich splicing factor 6.
    
 0.796
LOC103360130
Serine and arginine rich splicing factor 4.
    
 0.796
LOC103359433
Serine and arginine rich splicing factor 5b.
    
 0.796
ENSSPAP00000029132
RRM domain-containing protein.
    
 0.796
LOC103363951
RRM domain-containing protein.
    
 0.790
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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