STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371965TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (898 aa)    
Predicted Functional Partners:
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.985
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.985
taf1
Transcription initiation factor TFIID subunit.
    
 0.979
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.979
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.979
taf13
TATA-box binding protein associated factor 13.
    
 0.979
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.978
LOC103373359
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.964
LOC103372846
Transcription initiation factor TFIID subunit 6-like.
    
 0.964
LOC103367729
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.963
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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