STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyyr1Cysteine/tyrosine-rich 1. (156 aa)    
Predicted Functional Partners:
LOC103360623
SPARC-like 1.
   
    0.634
clec14a
C-type lectin domain-containing protein.
   
  
 0.580
cd93
Uncharacterized protein.
   
  
 0.580
ENSSPAP00000025588
Uncharacterized protein.
      
 0.576
LOC103368298
WW domain binding protein 1.
      
 0.556
shisal1
Shisa like 1b.
      
 0.502
acer2
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
    0.489
SLC4A11
Solute carrier family 4 member 11.
      
 0.418
slc4a11
Solute carrier family 4 member 11.
      
 0.418
mmrn2
EMI domain-containing protein.
  
    0.407
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.