STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec62SEC62 homolog, preprotein translocation factor. (423 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 0.999
ENSSPAP00000003713
SEC61 translocon gamma subunit.
    
 
 0.987
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.970
LOC103375513
Plug_translocon domain-containing protein.
   
 
 0.959
LOC103358725
Plug_translocon domain-containing protein.
   
 
 0.959
stk39
Serine threonine kinase 39.
    
 
 0.926
oxsr1
Protein kinase domain-containing protein.
    
 
 0.926
LOC103375029
Oxidative stress responsive kinase 1b.
    
 
 0.926
LOC103360287
Oxidative stress responsive kinase 1a.
    
 
 0.926
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
     
 0.916
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.