STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356807Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)    
Predicted Functional Partners:
LOC103365293
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.935
jun
BZIP domain-containing protein; Belongs to the bZIP family.
   
 0.914
ENSSPAP00000019452
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.855
LOC103353006
Death domain-containing protein.
    
 0.843
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.843
LOC103370974
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 0.833
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
  0.829
nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
  0.748
ENSSPAP00000013362
Uncharacterized protein.
    
 0.742
ENSSPAP00000013393
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
    
 0.742
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (20%) [HD]