STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000016807Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
samd7
Sterile alpha motif domain containing 7.
      
 0.525
ENSSPAP00000013995
BCL2 interacting protein like.
      
 0.524
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.519
gpr142
G protein-coupled receptor 142.
      
 0.504
otos
Otospiralin.
      
 0.499
klhl8
Kelch-like family member 8.
      
 0.491
BBOF1
Basal body orientation factor 1.
      
 0.471
cops9
COP9 signalosome subunit 9.
      
 0.426
LOC103364091
SERTA domain-containing protein.
  
   
 0.424
vcpip1
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.418
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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