STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000016954Uncharacterized protein. (763 aa)    
Predicted Functional Partners:
pycard
PYD and CARD domain containing.
   
 0.948
bcl2l1
BCL2 like 1.
    
 0.934
LOC103365897
BH4_2 domain-containing protein.
    
 0.934
nod2
Nucleotide-binding oligomerization domain containing 2.
    
 0.903
nod1
Nucleotide-binding oligomerization domain containing 1.
    
 0.901
ENSSPAP00000024086
BH4_2 domain-containing protein.
   
 0.848
bcl2
BCL2 apoptosis regulator b.
   
 0.848
LOC103357826
Caspase a; Belongs to the peptidase C14A family.
   
 0.823
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.760
LOC103362339
Interleukin-1.
   
 0.758
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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