STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mthfs5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (202 aa)    
Predicted Functional Partners:
gart
Phosphoribosylglycinamide formyltransferase.
   
 0.972
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
   
 0.962
ftcd
Formimidoyltransferase cyclodeaminase.
    
 0.955
mthfd2l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
    
 0.950
LOC103363193
Uncharacterized protein.
    
 0.950
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
   
 0.933
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
     
 0.914
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
 
 0.910
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.851
shmt1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.851
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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