STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadm4Cell adhesion molecule 4. (421 aa)    
Predicted Functional Partners:
LOC103360608
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.616
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.616
ENSSPAP00000013479
Uncharacterized protein.
    
  0.616
LOC103376248
Uncharacterized protein.
    
  0.616
ENSSPAP00000008117
Uncharacterized protein.
    
  0.607
hgfac
HGF activator.
    
  0.607
ENSSPAP00000025007
Uncharacterized protein.
    
  0.607
ENSSPAP00000025109
Hyaluronan binding protein 2.
    
  0.607
LOC103363383
Uncharacterized protein.
   
  0.594
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
  0.589
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.