STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep85Centrosomal protein 85. (799 aa)    
Predicted Functional Partners:
sox13
SRY-box transcription factor 13.
    
 
 0.771
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.746
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
 0.746
LOC103360420
Macrophage stimulating 1 receptor a.
    
 0.746
mst1r
Macrophage stimulating 1 receptor b.
    
 0.746
ENSSPAP00000018937
Uncharacterized protein.
    
 
 0.620
ENSSPAP00000008988
SRY-box transcription factor 5.
    
   0.615
ENSSPAP00000011776
Uncharacterized protein.
    
   0.615
rttn
Rotatin.
      
 0.575
pkhd1l1
Si:ch211-244a23.1.
    
 0.541
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.