STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b1Solute carrier family 35 member B1. (326 aa)    
Predicted Functional Partners:
LOC103365965
PWP2 small subunit processome component.
 
 
    0.881
tmem208
Transmembrane protein 208.
   
 
 0.606
mydgf
Myeloid-derived growth factor.
   
    0.580
gart
Phosphoribosylglycinamide formyltransferase.
  
  
 0.569
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
  
 0.564
derl1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
  
 0.553
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
  
 
 0.551
xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound.
  
 
 0.551
LOC103363865
FAST kinase domains 3.
    
 0.547
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
    
 0.546
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.