STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373124Ankyrin repeat and SOCS box containing 15b. (543 aa)    
Predicted Functional Partners:
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.680
LOC103366697
Fleer.
    
 0.660
rela
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.640
REL
REL proto-oncogene, NF-kB subunit.
   
 0.640
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.640
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
  0.637
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
  0.630
irak4
Interleukin-1 receptor-associated kinase 4.
   
 0.619
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
traf7
TNF receptor-associated factor 7.
    
 0.614
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.